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musabase.org favicon MusaBase musabase.org

Excellent Practice20
Improvement Could be Made11
Critical Issues to Attend18
Nov 26, 2024 12:42 AM

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Detailed Reviews

Related Category
Most related categories of this website.

archive   audio   club   css   database   forum   maps   tutorials  

Title
MusaBase

Words count: 1    Unique Words: 1    Length: 8 characters
[ To optimize the page title, Use this SEO Title Optimizer ]

The title is too short! that has less than 10 characters.

The title will be displayed in search engine results in the form of a direct link to the site.

Tips:
1. ideally, the title should contain 10 to 70 characters, including spaces. (Google displays up to 70 characters in the title, and takes into account only the first 12 words.)
2. put the most important and relevant keywords in the title, try not to repeat any word.
3. each individual page should have a unique title.
Description
Words count: 0    Length: 0 characters
[ To optimize the page description, Use this SEO Meta Description Optimizer ]


Meta Description is not set.

Meta Descriptions provide concise explanations of the contents of web pages, that are commonly used by search engines on search result pages to display preview snippets for a given page.

Tips:
1. it is best to keep meta descriptions between 70-160 characters.
2. a readable, compelling description using important keywords can draw a much higher click-through rate of searchers to the given web page.
3. avoid keyword stuffing, ensure each page has its own unique description.
Google SERP Preview
MusaBase www.musabase.org/

[ To optimize this Google SERP preview, Use this Google SERP Optimizer ]

Page description is missing.

an optimized SERP snippet will have a higher click through rate.

Tips:
1. make sure the title is clear, simple, straight to the point.
2. make sure the description is relevant and properly summarized the page content.
Keywords
Words count: 0    Length: 0 characters    keyword phrases count : 0

Meta Keywords is not set.
[ To optimize the meta keywords, Use this SEO Meta Keywords Optimizer ]

Meta keywords should not be ignored, though they are not a major ranking factor for most of search engines nowadays. A Meta keywords tag is supposed to be a brief and concise list of the most important themes of your page

Tips:
1. keep your list of keywords or keyword phrases down to 10 - 20 unique words or phrases.
2. separate the words or phrases using a comma (you do not need to leave a space between words separated by commas).
3. do not repeat words or phrases.
4. put your most important word or phrases at the beginning of your list.
Keywords Cloud
This keywords cloud gives your an idea of what are those important keywords appears in your website.

accept  accessions  acuminata  analysis  banana  blast  breeding  browser  cart  clone  collection  compare  cookies  crosses  data  designer  download  faq  features  field  filtering  genome  genotyping  graphical  images  login  musa  musabase  phenotyping  plates  programs  project  search  selection  sigatoka  site  traits  trials  tutorials  upload 

Top 20 Keywords
Total Terms Count: 253

Excellent! No terms has a density of more than 3%, all are optimized to be within 1% - 3%.

Top 20 terms occurance and density
KeywordIn DomainIn TitleIn DescriptionIn Heading In Body Density
browser 7 2.77%
search 6 2.37%
trials 6 2.37%
phenotyping 6 2.37%
accessions 6 2.37%
genome 6 2.37%
genotyping 5 1.98%
musabase 4 1.58%
data 4 1.58%
breeding 4 1.58%
crosses 3 1.19%
field 3 1.19%
download 3 1.19%
collection 3 1.19%
accept 3 1.19%
programs 3 1.19%
banana 3 1.19%
project 3 1.19%
site 2 0.79%
features 2 0.79%

keyword density can be used as a factor in determining whether a web page is relevant to a specified keyword or keyword phrase.


Tips:
1. the optimum keyword density to be 1.0% - 3.0%. Using a keyword more than that could be considered search spam.
2. overuse of keywords, a practice called keyword stuffing, will cause a web page to be penalized.
Highlight
<H1><H2><H3><H4><H5><H6><B><U><I><EM><STRONG>Total
021089400188234020448

Excellent! The page is using HTML headings (<H1> - <H6>) and inline emphasis tags (<EM><B><I><EM><STRONG>)

<H2>

(2)
Individual Crosses:
Group of Crosses:

<H3>

(108)
Breeding programs
Phenotyping
East African Highland
bananas project & Partners
& Partners
& Partners
New to the database?
This workflow will guide you through tissue sampling an experiment
At which level do you plan to keep track of your sampling?
Select a field trial
Plant entries in your field trial
Create tissue sample entries for this trial
Complete! You have all the entities you need to conduct your sampling.
Complete! You have all the entities you need to conduct your sampling.
This workflow will guide you through uploading a new trial or trials into the database
Enter information about the experiment and upload your trial layout
Is your trial linked with other field trials, genotyping plates, or crossing experiments in the database? If you are unsure, you can skip this. This information can be added from the trial detail page after the trial is saved.
Fixing the missing accession(s) problem
Trial Upload Error Messages
Fixing the missing seedlot(s) problem
Trial Upload Error Messages
Submit your trial again. You should have corrected all errors by now, but if not please take a look at the errors in the red box below. You can continue to modify your file and then click Upload until it works.
There exist these problems in your file:
Finished! Your trial is now in the database
Finished! Your trial is now in the database
This workflow will guide you through designing a new trial in the database
Enter basic information about the trial
Design your trial layout
Is your trial linked with other field trials, genotyping plates, or crossing experiments in the database? If you are unsure, you can skip this. This information can be added from the trial detail page after the trial is saved.
Specify the number of rows and columns for the entire field
If you want to change the way in which plot names will be generated by the database
Review the generated trial layout. Make sure to click Submit at the bottom of this page if you approve of the trial!
Complete! Your trial was saved in the database.
Complete! Your trial was saved in the database.
This workflow will guide you through uploading genotypes into the database
Select the type of genotyping data being uploaded
Select the genotyping project or create a new one. A genotyping project is a specific genotyping event. You can have many genotyping projects under the same genotyping protocol to indicate that those genotyping events used the same markers.
Provide info about the genotyping protocol used. The genotyping protocol represents a specific instance of how genotypes were called for a set of markers in a genotyping platform. Many genotyping projects can use the same genotyping protocol.
Provide genotype information
Finalize and submit your genotyping data
Complete! Your genotyping data was saved in the database.
This workflow will guide you through adding a genotyping plate in the database
Select a genotyping project
Provide info about your plate
Provide information about the wells in your plate
You want to upload an existing plate layout
You want to upload a Coordinate Android Application file.
You want to upload a Custom Android Application file.
You want to design a completely new plate.
Is your genotyping plate linked with field trials in the database? This information can also be added from the genotyping plate detail page once the trial is saved in the database.
Finalize and submit your genotyping plate
Complete! Your genotyping plate was saved in the database.
Complete! Your genotyping plate was saved in the database.
What is a seedlot inventory?
Make sure you are collecting seedlot inventory in the following format
Select your file and upload seedlot inventory
Fixing the missing seedlot(s) problem
Seedlot Inventory Upload Error Messages
Submit your inventory again. You should have corrected all errors by now, but if not please take a look at the errors in the red box below. You can continue to modify your file and then click Upload until it works.
There exist these problems in your file:
Finished! Your seedlot inventory is in the database
Finished! Your seedlot inventory is in the database
What are seedlots?
Seedlots fall into two categories
Make sure your file matches the correct file format
Provide basic information about the seedlots and upload your file
Fix all errors in your file
Seedlot Upload Error Messages
Submit your seedlots again. You should have corrected all errors by now, but if not please take a look at the errors in the red box below. You can continue to modify your file and then click Upload until it works.
There exist these problems in your file:
Finished! Your seedlots are now in the database
Finished! Your seedlots are now in the database
Add the missing accessions to a list
Introduction
Select a crossing experiment for your crosses
Enter basic information about the crosses and upload your file
You want to upload crosses in an Excel file with accession or population names for parents
You want to upload crosses in an Excel file with accession and plot names for parents
You want to upload crosses in an Excel file with accession and plant names for parents
You want to upload crosses in an Excel file with simplified information for parents
Finished! Your crosses are now in the database
Finished! Your crosses are now in the database
What is a cross?
Select a crossing experiment
Enter basic information about the cross
Enter basic information about the cross
Optional: If you choose to record exact cross parents, you can do so.
If you would like to add auto-generated progeny names for this cross, you can add it here
Optional:
Finished! Your cross is now in the database
Finished! Your cross is now in the database
What are crossing experiments?
Enter basic information about the crossing experiment
Finished! Your crossing experiment is now in the database
Finished! Your crossing experiment is now in the database
Your Lists
Elements not found:
Optional: Add Missing Accessions to A List
Mismatched case
Multiple mismatched case
List elements matching a synonym
...

<H4>

(94)
Old browser version detected
What are you interested in? For General Help
Upload an experimental field trial into the database that you have saved on your computer in Excel
Design a completely new experimental field trial in the database
Catalog your available seed inventory into the database
Upload phenotypic data into the database that you have saved on your computer in Excel
Plan tissue sampling
Upload crosses and crossing information into the database
Print barcode labels for my experiment (for your plots or plants or tissue samples in the field, or for your 96 well plate and tissue samples)
Analyze phenotypic performance across trials
Prepare a 96 or 384 well plate for a genotyping experiment
Upload VCF genotypic data
Tissue Sampling
Field trial is not relevant for the type of tissue sampling you selected. Go to next step.
Plant entries not relevant for the type of tissue sampling you selected. Go to next step.
Plant entries exist for this trial. Go to next step.
Please create plant entries for this trial.
Field trial tissue sample entries not relevant for the type of tissue sampling you selected. Go to next step.
Tissue sample entries exist for this trial. Go to next step.
Workflow for seedlot inventory
I have new seedlots that need to be added into the database.
I conducted an inventory (in weight(g)) and want to update the database to reflect the current state of the inventory.
Workflow for uploading phenotypes
Workflow for trial barcoding
Workflow for comparing one or many trials
Upload Existing Trial(s)
Upload Template Information
Upload Template Information
Design New Trial
Which accessions will be in the field?
Which crosses will be in the field?
Which family names will be in the field?
Number of Plants:
Number of Columns (required):
Number of columns between two check columns (Optional):
Which seedlots will you grow in the field? This is optional and can be decided later. If you do not know exactly which seedlot packets you will be planting at this time, you can add this information on the Trial Detail Page after the trial has been saved in the database.
Add Field Management Factor to Design
Add Field Management Factor to Design
Partially Replicated Design Usage Help
Background:
Design Parameters:
NOTE:
Upload Genotypes
Upload VCF Template Information
Upload Intertek Template Information
Upload Tassel HDF5 Template Information
Upload SSR Marker Info Template Information
Upload SSR Marker Info Error
Success
Upload SSR Protocol (Marker Info)
Upload SSR Data Template Information
Upload KASP data Template Information
Add Genotyping Plate
Upload Template Information
Upload Template Information
Upload Template Information
Upload Seedlot Inventory
Upload Template Information
Upload Seedlots
Upload Template Information For Named Accessions
Upload Template Information For Harvested Seedlots
Create New Seedlot
Add Accessions
Upload Accessions Template Information
Accessions to be Added
Fuzzy Matches
Found Accessions
Accessions Saved
Upload Crosses
Upload Crosses File Error
Template Information
Add New Cross
Template Information
Success
Add New Crossing Experiment
Please Note: Website Data Usage Policy
MusaBase adheres to the Toronto agreement on prepublication data release
Featured Publication
Public Lists
List Contents
List Validation Report: Failed
Fuzzy Search Results
Synonym Search Results
Available Seedlots
Public Datasets
Dataset Contents
Dataset Validation Failed
Your Calendar
Add New Event
Event Info
Edit Event
Working
Progress
<B> (188)File format information
File format information
Trials may be uploaded in an Excel file (.xls or .xlsx)
Header:
Header as a string:
Header:
Header as a string:
Header:
Header as a string:
Required fields:
Optional fields:
Treatments:
Trials may be uploaded in an Excel file (.xls or .xlsx)
Multiple Trial Designs:
Header:
Header as a string:
Required fields:
Additional optional fields:
Treatments:
Background:
Design Parameters:
NOTE:
File format information
File format information
File format information
File format information
File format information
This is for uploading VCF genotype data.
VCF is a tab separated format. If your VCF is very large (greater than 10GB), please consider converting it to an HDF5 (.h5) file using Tassel, and uploading the HDF5 formatted file instead.
Header:
Required fields:
This is for uploading Intertek genotype data.
Please use csv formatted files
For Intertek SNP Result Grid File:
For Intertek SNP Information File:
Optional:
Optional columns:
Quality
Filter
Info
Format
Sequence
This is for uploading Tassel HDF5 genotype data.
Please use HDF5 (.h5) formatted files that work with Tassel
Uploading an HDF5 file is important when the size of the VCF grows greater than 10GB
SSR marker info may be uploaded in an Excel file (.xls or .xlsx)
Header:
Required columns:
Optional columns (required in the header, but value may be left blank)
File format information
SSR data may be uploaded in an Excel file (.xls or .xlsx)
Example of SSR Data Spreadsheet:
Column Info:
This is for uploading KASP genotype data.
Please use csv formatted files
For KASP Marker Information File:
Optional:
Note:
Optional columns:
FacilityMarkerName:
For KASP Result File:
Note:
Required columns:
MarkerName:
SampleName:
SNPcall:
Xvalue:
Yvalue:
Required columns:
FacilityMarkerName:
FacilitySampleName:
SNPcall:
Xvalue:
Yvalue:
File format information
File format information
File format information
This is for uploading a pre-existing genotyping plate layout.
File must be Excel file (.xls or .xlsx)
Header:
Required fields:
Optional fields:
"facility_identifier"
This is for uploading a Default Coordinate Android Application exported plate layout.
File must be a CSV file (.csv)
Header:
Required fields:
Optional fields:
"facility_identifier"
This is for uploading a Custom Coordinate Android Application exported plate layout.
File must be a CSV file (.csv)
Header:
Required fields:
Optional field:
"Facility Identifier"
Seedlots may be uploaded in a CSV file (.csv)
Header:
Required fields:
Header:
Required fields:
AND/OR
...
<U> (2)For KASP Marker Information File:
For KASP Result File:
<I> (34)R. similis
C. sordidus
plot_name
plot_number
accession_name
cross_unique_id
family_name
block_number
rep_number
row_number
col_number
is_a_control
seedlot_name
num_seed_per_plot
weight_gram_seed_per_plot
Creates plant entries for each plot. Ignore if not adding plant entries.
Location abbreviation will automatically be added as a prefix if multiple locations are selected.
Creates plant entries for each plot. Ignore if not adding plant entries.
Optional
Optional
Optional
Optional
Optional
Optional
Optional
Optional
Optional
(optional)
(optional)
<STRONG> (20)name
abbreviation
recommended format
not recommended
.xls or .xlsx
.csv
.txt or .tsv
.ssv
.xls or .xlsx
.csv
.txt or .tsv
.ssv
.xls or .xlsx
.csv
.txt or .tsv
.ssv
.xls or .xlsx
.csv
.txt or .tsv
.ssv


HTML headings and emphasis tags are the most basic forms to indicate important content.

Tips:
1. use your keywords in the headings and make sure the first level heading (<H1>) includes the most important keywords.
2. never duplicate the title tag content in the heading tags.
3. for more effective SEO, use only one <H1> tag per page
Reading Level
0

The page text content is a bit too difficult to be read and understood!

Ensure your page content text can be read and understood by most of your site visitors. not too difficult nor too simple.

Tips:
1. a score below 30, indicates the text content is too difficult to be read and understood.
2. a sore above 80, may suggest that the site is lack of in-depth and expertise of its topics (low quality content).
3. an optimal reading level score shall be 50-70.
Language
the website does not declare its language in use.

the detected language is : en

Declare the language in use can help search engine to better understand and rendering your page, especially when special characters are encountered.
Page Encoding
utf-8 Excellent! the website declared its character encoding.

Declare the character encoding can help search engine to better rendering your page, especially when it comes to
non-asii characters.
Favicon
Excellent! the website has a shortcut favicon image.

RSS
the website does not have a RSS Feed.

Robots.txt
http://musabase.org/robots.txt Excellent! the website has a Robots.txt file to regulate search engine crawlers access.

Robots.txt file can be used to regulate access of search engine crawlers, properly configured robots.txt file can help
crawlers to better understand your website.

Tips:
1. grand robots access to those pages you wish them to crawl.
2. restrict access to those pages you do not wish search engines to see and crawl.
XML Sitemap
XML Sitemap is not presented for the site.
[ To generate XML sitemap, Use this XML Sitemap Generator ]

Sitemap helps search engine crawler to identify your website pages.

Tips:
1. ensure all your important pages are listed in the sitemap.
2. ensure to indicate the frequency of change and importance of each url.
3. inform search engines of the location/URL of your sitemap (eg, For Google, you can set the website sitemap location through Google Webmaster management panel).
Loading Time
0.33 seconds - 329.86 Kb/s

Excellent! the site is pretty fast and it takes less than 1 second to load.

Estimated loading time for different internet connections
Modem
(56Kbits/s)
Mobile/HSDPAM
(7.2Mbits/s)
ADSL
(8Mbits/s)
Cable
(30Mbits/s)
Optical Fibre
(100Mbits/s)
15.55 s 0.12 s 0.11 s 0.03 s 8.71 ms

Site speed is becoming an crucial ranking factor. Slow page loading is one of the biggest complains of web users. If the loading time is too long, you may need to check your server, network, or system codes and structure.

Tips:
1. ideal loading time is less than 1 seconds, if it take more than 5 seconds to load your site, likely users will run out of patience, so do search engines.
2. improve your SEO by optimizing your website to have a small size and faster responding server.
Total Size
109 Kb (108,855 bytes)

Excellent! the page size is just nice, that is within 30K-150K!

Page size affects the speed of your website.

Tips:
1. try to keep you page size between 30K-150K
2. put javascript and style sheet in separate files, and link them to the main page.
3. use optimized images for web and set up your server with gzip for downloading
Text To Code Ratio
Total Size Text Size HTML Code Size Text/HTML Code Ratio
109 Kb (108,855 bytes) 2 Kb (1,947 bytes) 107 Kb (106,908 bytes) 1.82 %


The Text/HTML Code Ratio is a bit too low, you may not have enough content to rank well!

the ratio of text to HTML code should always be above 15% for good SEO gain,
it is below 15% then that means that your website probably needs more text content.

Tips:
1. a ratio between 25% and 70% is ideal, when it goes beyond than that, the page might run the risk of being considered as spam. As long as the content is relevant and gives essential information, it is a plus point to have more of it.
2. improve your SEO by adding more relevant text to your pages and also increasing your keyword density.
Flash
Excellent! No flash component is detected on this page.

Flash content can not be properly indexed by search engines, and normally flash file is large in size, which slow down the loading of your page.

Tips:
1. avoid flash content whenever possible if you wish to have a fast and SEO friendly website.
Frame
Excellent! No frame is detected on this page.

Framesets and individual frames could cause problem for search engine to crawl your pages

Tips:
1. avoid frames whenever possible.
2. search engines do not like frames.
3. use iframe instead if you really have no choice.
Inline CSS
350 Inline CSS components are detected on this page.

It is a good practice to move inline CSS rules into an external CSS file in order to make your page lighter and increasing the text to code ratio.

Tips:
1. move inline css rules to external css file.
2. separate style from html.
Nested Table
Excellent! No nested table is detected on this page (nested table : 0, total table : 66)

nested tables could slow down page rendering and lead to bad user experience.

Tips:
1. avoiding <table> for your page layout.
2. using <div> instead of <table>.
Plain Text Email
1 Email Address (m*************************@group.calendar.google.com) was detected on this page.

Redirect Count
1 redirection was detected for loading this page.

Using HTTPS
Excellent! HTTPS is used for your page.

WWW Resolve
the websites http://www.musabase.org and http://musabase.org DOES NOT resolved to the same url.

Search Engines treat URLs with or without "www" as two different records.

Tips:
1. edit your .htaccess file and permanently redirect one to the other (eg redirect www.mysite.com to mysite.com).
IP Canonicalization
Excellent! IP address of the site http://132.236.81.172 is forwarded to its domain name site https://www.musabase.org/.

URL Rewrite
Non SEO Friendly URLs
http://musabase.org/jbrowse2_musabase/?data=data/json/Musa_acuminataV2
http://musabase.org/search/direct_search.pl?search=directory


You may use url rewrite techniques to make these 2 urls to be SEO friendly.

clean, short and relevant URLs are favoured by users and search engines

Tips:
1. use url rewrite to turn dynamic pages with query parameters into seo friendly static pages.
2. put your important keywords in the url.
3. good urls are not only user friendly but also seo friendly.
Underscore In URL
URLs with underscore
http://musabase.org/search/genotyping_trials
http://musabase.org/search/genotyping_data_projects
http://musabase.org/search/genotyping_protocols
http://musabase.org/search/stocks_using_genotypes
http://musabase.org/breeders/manage_roles/
http://musabase.org/breeders/manage_programs/
http://musabase.org/tools/label_designer
http://musabase.org/breeders/identifier_generation
http://musabase.org/accession_usage
http://musabase.org/tools/image_analysis
http://musabase.org/jbrow...se/?data=data/json/Musa_acuminataV2
http://musabase.org/pages/sigatoka_and_fusarium_collection
http://musabase.org/breeders/manage_programs/
http://musabase.org/breeders/manage_programs
http://musabase.org/#single_tab
http://musabase.org/#multiple_tab
http://musabase.org/#with_list_tab
http://musabase.org/#with_file_tab
http://musabase.org/usage_policy
http://musabase.org/breeders/manage_programs
http://musabase.org/breeders/manage_programs
http://musabase.org/breeders/manage_roles/
http://musabase.org/search/direct_search.pl?search=directory


You have 23 Urls with underscore.

Search Engines treat hyphen as word separator, they do not treat underscore as word separator.


Tips:
1. use hyphen "-" instead of underscore "_" to optimize your page url.
2. help search engines to better understand your url, eventually will benefit your page`s ranking.
Links
Internal Links
(link to pages within this domain)
External Links
(link to pages on other websites)
Total
92 53 145


You have more than 100 links (145).

Internal Links (link to pages within this domain) - 92
URL Anchor Text
http://musabase.org/search/clone-order.plorder
http://musabase.org/
http://musabase.org/MusaBase
http://musabase.org/breeders/searchWizard
http://musabase.org/search/phenotypes/stockAccessions and Plots
http://musabase.org/search/organismsOrganisms
http://musabase.org/search/crossProgenies and Crosses
http://musabase.org/search/trialsField Trials
http://musabase.org/search/genotyping_trialsGenotyping Plates
http://musabase.org/search/genotyping_data_projectsGenotyping Data Projects
http://musabase.org/search/genotyping_protocolsGenotyping Protocols
http://musabase.org/search/stocks_using_genotypesAccessions Using Genotypes
http://musabase.org/search/traitsTraits
http://musabase.org/search/markersMarkers
http://musabase.org/search/imagesImages
http://musabase.org/search/peoplePeople
http://musabase.org/help/faq.plFAQ
http://musabase.org/ftpFTP Data
http://musabase.org/breeders/manage_roles/User Roles
http://musabase.org/breeders/manage_programs/Breeding Programs
http://musabase.org/breeders/locationsLocations
http://musabase.org/breeders/accessions/Accessions
http://musabase.org/breeders/seedlots/Seed Lots
http://musabase.org/breeders/crosses/Crosses
http://musabase.org/breeders/trials/Field Trials
http://musabase.org/breeders/genotyping/Genotyping Plates
http://musabase.org/breeders/samples/Tissue Samples
http://musabase.org/fieldbookField Book App
http://musabase.org/breeders/phenotyping/Phenotyping
http://musabase.org/barcodeBarcodes
http://musabase.org/tools/label_designerLabel Designer
http://musabase.org/breeders/nirs/NIRS
http://musabase.org/breeders/markers/Markerset
http://musabase.org/breeders/downloadDownload
http://musabase.org/breeders/uploadUpload
http://musabase.org/breeders/odkODK Data Collection
http://musabase.org/breeders/identifier_generationIdentifier Generation
http://musabase.org/analysesStored Analyses
http://musabase.org/tools/trial/comparison/listCompare Trials
http://musabase.org/tools/graphicalfilteringGraphical Filtering
http://musabase.org/selection/indexSelection Index
http://musabase.org/solgs/searchGenomic Selection
http://musabase.org/accession_usageAccession Usage
http://musabase.org/tools/mixedmodelsMixed Models
http://musabase.org/tools/trial/comparison/listCompare Trials
http://musabase.org/tools/graphicalfilteringGraphical Filtering
http://musabase.org/tools/heritabilityHeritability
http://musabase.org/tools/stabilityStability AMMI
http://musabase.org/tools/solgwasGWAS
http://musabase.org/tools/boxplotterBoxPlotter
http://musabase.org/tools/image_analysisImage Analysis
http://musabase.org/tools/blast/BLAST
http://musabase.org/tools/onto/Ontology Browser
http://musabase.org/tools/composeCompose a New Trait
http://musabase.org/jbrow...se/?data=data/json/Musa_acuminataV2Musa acuminata genome
http://musabase.org/ftp/S...Phenotyping for FOC-R1 - 220822.pdfPhenotyping for FOC-R1
http://musabase.org/ftp/SOPs/Sigatoka SOP - 220822.pdfPhenotyping for Sigatoka
http://musabase.org/ftp/S... R. similis resistance - 150722.pdfPhenotyping for R. similis
http://musabase.org/ftp/S...Ps/Phenotyping for BXW - 220822.pdfPhenotyping for BXW
http://musabase.org/ftp/S...C. sordidus resistance - 270722.pdfPhenotyping for C. sordidus re...
http://musabase.org/pages/sigatoka_and_fusarium_collectionSigatoka and Fusarium Collecti...
http://musabase.org/aboutAbout
http://musabase.org/contact/formContact
http://musabase.org/help/index.plCite Musabase
http://musabase.org/breeders/dbstatsDatabase statistics
http://musabase.org/help/index.plHelp
http://musabase.org/help/faq.plFAQ
http://musabase.org/forum/topics.plForum
http://musabase.org/breeders/manage_programs/Breeding programs
http://musabase.org/breeders/manage_programsDesign and create breeding tri...
http://musabase.org/breeders/accessionsUpload accessions
http://musabase.org/breeders/crossesMake crosses
http://musabase.org/breeders/phenotyping/Phenotyping
http://musabase.org/breeders/phenotyping/Upload phenotypes
http://musabase.org/fieldbookUpload fieldbook
http://musabase.org/breeders/downloadDownload data with list
http://musabase.org/breeders/searchDownload data with Wizard sear...
http://musabase.org/#myCarouselPrevious
http://musabase.org/#myCarouselNext
http://musabase.org/#single_tabSingle Trial Design
http://musabase.org/#multiple_tabMultiple Trial Designs
http://musabase.org/#with_list_tabUsing Lists
http://musabase.org/#with_file_tabUploading a File
http://musabase.org/usage_policydata usage policy
http://musabase.org/breeders/manage_programsProduct Profile Management
http://musabase.org/breeders/manage_programsbreeding program manage
http://musabase.org/tools/mixedmodelsMixed Model tool
http://musabase.org/tools/mixedmodelsavailable
http://musabase.org/oldevents.plSee all events...
http://musabase.org/breeders/seedlots/Manage Seedlots
http://musabase.org/breeders/manage_roles/Calendar Permissions
http://musabase.org/search/direct_search.pl?search=directorydirectory search

External Links (link to pages on other websites) - 53
URL Anchor Text
http://browsehappy.comPlease upgrade your browser
https://solgenomics.github.io/sgn/Manual
https://www.youtube.com/channel/UC3jrvvzGKKEHzOriDBgnj0AVideo tutorials
https://twitter.com/solgenomicsTwitter
https://www.facebook.com/solgenomicsFacebook
http://www.slideshare.net...savabase-workshop-manage-fieldtrialManage trials tutorials @ SGN
http://www.slideshare.net...ard-search-and-list-management-demoUse search & list tutorials @ ...
http://www.crop-diversity.org/mgisMGIS
http://www.crop-diversity.org/mgis/accession-searchSearch accessions
http://www.crop-diversity.org/mgis/organisationsSearch germplasm collection
http://www.crop-diversity.org/mgis/taxonomyTaxonomy browser
http://www.nature.com/nat...al/v488/n7410/full/nature11241.htmlThe banana (Musa acuminata) ge...
http://banana-genome-hub.southgreen.fr/jbrowseBrowse the banana genome
http://banana-genome-hub.southgreen.fr/blastBLAST search
http://banana-genome-hub.southgreen.fr/downloadDownload reference genome
http://banana-genome-hub.southgreen.fr/downloadDownload resequencing project ...
http://eastafricanhighlandbananas.orgEast African Highland ...
https://www.biw.kuleuven....biosyst/plantenbiotechniek/tropicalKU Leuven
http://www.bioversityinte...n-use-of-bananas-tree-crops/banana/Bioversity International
http://www.rtb.cgiar.org/banana/RTB program
http://www.naro.go.ug/NARO Uganda
http://bti.cornell.edu/staff/dr-lukas-mueller/Mueller lab @BTI
https://solgenomics.github.io/sgnFor General Help
https://solgenomics.github.io/sgnDocumentation
https://solgenomics.github.io/sgnDocumentation
https://solgenomics.github.io/sgnDocumentation
https://cornell.zoom.us/j...wd=UWVzTG5qa25pWE1Vd3RqRkFSbkJSdz09Zoom Link
https://www.youtube.com/watch?v=eWnLfTJUsPsNARO: New Banana Breed Are Dis...
https://dl.sciencesocieti...ublications/tpg/articles/0/0/170090Genomic Prediction in a Multip...
https://plan.core-apps.co...nt/3cee484866e6d00c5e492240c4d5bad6BreedBase Workshop at PAG 30
https://plan.core-apps.co...nt/3cee484866e6d00c5e492240c4d5bad6BreedBase workshop
http://intlpag.orgPAG 30
http://btract.sgn.cornell.edu/btract/BTRACT
http://bananabreeding.iita.org/Breeding Better Bananas Projec...
http://banana-genome-hub.southgreen.fr/Southgreen Banana Genome Hub
http://www.crop-diversity.org/mgis/MGIS
http://www.promusa.org/MusapediaMusapedia
http://www.farmradio.org/Farm Radio
http://www.iita.org/banana-and-plantainIITA banana program
http://www.banana.go.ug/Ugandan banana research portal
http://www.istrc.orgInt'l Society for Tropical Roo...
https://btiscience.org/
https://breedbase.org
https://brapi.org/
https://www.iita.org/
https://www.naro.go.ug/
https://www.rtb.cgiar.org/banana/
https://btiscience.org/
https://breedbase.org
https://brapi.org/
http://www.iita.org/
https://www.naro.go.ug/
https://www.rtb.cgiar.org/banana/

reasonable number of links (below 100) per page will give a better user experience.


Tips:
1. keep the number of links per page below 100.
2. having more than 100 links in a single page will lead to a bad user experience, and it possibly runs into the risk of been considered as spam.
3. search engines may not follow all the links if you have too many of them in a single page.
Images
Total Images Alt Present Alt Missing
45 8 37


37 images do not have Alt values.

Image URL - 45
URL ALT Text
https://lh3.ggpht.com/O0a...UU1b5BWA_NygJ6ui4MgaAvL7gfqvVWqkOBscDaq4pn-vkwByUx=w300
http://musabase.org/documents/img/Firefox_logo_2019.png
https://km.support.apple.com/kb/image.jsp?productid=PL165
http://musabase.org/documents/img/o-logo.jpg
https://c.s-microsoft.com..._56x56.png?version=73aa5bf1-0743-11e7-8f71-718675c983bf
http://musabase.org/static/img/musabase/breeding_better_bananas_logo2.pngMusaBase Home
http://musabase.org/documents/img/musabase/carousel/kuleuven_logo.png
http://musabase.org/documents/img/musabase/carousel/bioversity_logo.jpg
http://musabase.org/documents/img/musabase/carousel/rtb_logo_green.jpg
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/collapser_minus.png
http://musabase.org/documents/img/collapser_plus.png
http://musabase.org/documents/img/collapser_minus.png
http://musabase.org/documents/img/collapser_plus.png
http://musabase.org/documents/img/collapser_minus.png
http://musabase.org/documents/img/collapser_plus.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/documents/img/info_icon.png
http://musabase.org/img/wheel.gif
http://musabase.org/documents/img/bti_logo_2024.png
http://musabase.org/documents/img/Breedbase_HighRes.png
http://musabase.org/documents/img/brapi-logo.svg
http://musabase.org/documents/img/IITA.pngIITA
http://musabase.org/documents/img/musabase/carousel/naro-logo.pngNARO
http://musabase.org/documents/img/2024-RTB-Breeding-logo.pngRTB
http://musabase.org/documents/img/bti_logo_2024.gifBoyce Thompson Institute
http://musabase.org/documents/img/Breedbase_HighRes.png
http://musabase.org/documents/img/brapi-logo.svg
http://musabase.org/documents/img/IITA.pngIITA
http://musabase.org/documents/img/musabase/carousel/naro-logo.pngNARO
http://musabase.org/documents/img/2024-RTB-Breeding-logo.pngRTB


search engines cannot `see` images, proper Alt content will help them to better understand and index images.

Tips:
1. always add alt attributes to images. Alt is mandatory for accessibility and for valid XHTML.
2. words used within an image`s Alt attribute should be its text equivalent and convey the same information.
3. use a human-readable caption and descriptive text around the image.
CSS
Style Block In Same Page Links to External Style Files Total
15 16 31


Too many (16) external style sheet files , it will slow down the downloading.

Links To External Stylesheet Files - 16
Stylesheet URL rel type
http://musabase.org/css/new_sgn.cssstylesheettext/css
http://musabase.org/css/jquery-sgn-theme/jquery-ui-1.10.3.custom.cssstylesheettext/css
http://musabase.org/css/jstree/themes/default/style.min.cssstylesheettext/css
http://musabase.org/css/fullcalendar.min.cssstylesheettext/css
http://musabase.org/documents/inc/datatables/jquery.dataTables.cssstylesheettext/css
http://musabase.org/css/bootstrap.min.cssstylesheettext/css
http://musabase.org/css/bootstrap-toggle/bootstrap-toggle.min.cssstylesheettext/css
http://musabase.org/css/ladda-themeless.min.cssstylesheettext/css
http://musabase.org/css/daterangepicker.cssstylesheettext/css
http://musabase.org/css/buttons/buttons.bootstrap.min.cssstylesheettext/css
http://musabase.org/css/buttons/buttons.dataTables.cssstylesheettext/css
http://musabase.org/css/bootstrap3-xl-class.cssstylesheettext/css
http://musabase.org/css/bootstrap-select.min.cssstylesheettext/css
http://musabase.org/css/datepicker.cssstylesheettext/css
http://musabase.org/css/nextgen-cassava-base-new.cssstylesheettext/css
http://musabase.org/docum...ts/inc/jquery-cassava-theme/jquery-ui-1.10.3.custom.cssstylesheettext/css

Script
Scripts Block In Same Page Links to External Script Files Total
85 47 132


Too many (47) external scripts files , it will slow down the downlaoding.

Links To External Script Files - 47
Script URL Type
https://cdnjs.cloudflare....s/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMMLtext/javascript
http://musabase.org/js/legacy/jquery.jstext/javascript
http://musabase.org/js/legacy/jqueryui.jstext/javascript
http://musabase.org/js/legacy/sgn.jstext/javascript
http://musabase.org/js/legacy/jquery/simpletooltip.jstext/javascript
http://musabase.org/js/legacy/jquery/cookie.jstext/javascript
http://musabase.org/js/legacy/MochiKit/Base.jstext/javascript
http://musabase.org/js/legacy/MochiKit/Logging.jstext/javascript
http://musabase.org/js/legacy/CXGN/Effects.jstext/javascript
http://musabase.org/js/legacy/CXGN/Dataset.jstext/javascript
http://musabase.org/js/legacy/CXGN/Page/FormattingHelpers.jstext/javascript
http://musabase.org/js/legacy/CXGN/Base.jstext/javascript
http://musabase.org/js/legacy/CXGN/Cookie.jstext/javascript
http://musabase.org/js/legacy/CXGN/User.jstext/javascript
http://musabase.org/js/legacy/CXGN/UserPrefs.jstext/javascript
http://musabase.org/js/legacy/CXGN/Page/Toolbar.jstext/javascript
http://musabase.org/js/legacy/CXGN/List.jstext/javascript
http://musabase.org/js/legacy/CXGN/Login.jstext/javascript
http://musabase.org/js/legacy/bootstrap_min.jstext/javascript
http://musabase.org/js/legacy/CXGN/BreedersToolbox/HTMLSelect.jstext/javascript
http://musabase.org/js/legacy/bootstrap-toggle_min.jstext/javascript
http://musabase.org/js/legacy/jquerymigrate-min.jstext/javascript
http://musabase.org/js/legacy/jquery/dataTables-min.jstext/javascript
http://musabase.org/js/legacy/CXGN/GuidedHelp.jstext/javascript
http://musabase.org/js/legacy/jquery/iframe-post-form.jstext/javascript
http://musabase.org/js/legacy/CXGN/BreedersToolbox/AddTrial.jstext/javascript
http://musabase.org/js/legacy/CXGN/BreedersToolbox/UploadTrial.jstext/javascript
http://musabase.org/js/legacy/CXGN/BreedersToolbox/Trial.jstext/javascript
http://musabase.org/js/legacy/CXGN/Trial.jstext/javascript
http://musabase.org/js/legacy/CXGN/BreedersToolbox/GenotypingTrial.jstext/javascript
http://musabase.org/js/legacy/CXGN/BreedersToolbox/Accessions.jstext/javascript
http://musabase.org/js/legacy/CXGN/BreedersToolbox/UploadPedigrees.jstext/javascript
http://musabase.org/js/legacy/CXGN/BreedersToolbox/Crosses.jstext/javascript
http://musabase.org/js/legacy/CXGN/BreedersToolbox/FieldBook.jstext/javascript
http://musabase.org/js/legacy/CXGN/BreedersToolbox/UploadPhenotype.jstext/javascript
http://musabase.org/js/legacy/CXGN/BreederSearch.jstext/javascript
http://musabase.org/js/legacy/CXGN/TrialTreeFolders.jstext/javascript
http://musabase.org/js/legacy/workflow.jstext/javascript
http://musabase.org/js/legacy/d3/d3v4Min.jstext/javascript
http://musabase.org/js/legacy/moment_min.jstext/javascript
http://musabase.org/js/legacy/daterangepicker.jstext/javascript
http://musabase.org/js/legacy/calendar/moment_min.jstext/javascript
http://musabase.org/js/legacy/calendar/fullcalendar_min.jstext/javascript
http://musabase.org/js/legacy/jquery/dataTables.jstext/javascript
http://musabase.org/js/legacy/calendar/fullcalendar_gcal_min.jstext/javascript
http://musabase.org/js/legacy/calendar/bootstrap_datepicker_min.jstext/javascript
https://platform.twitter.com/widgets.jstext/javascript

put scripts together and link them from an external files rather then put them in the same file as the main page.

Tips:
1. reduce the use of in-page scripts, put them in separate files and link them in.
2. reduce the number of external script files, it will help browser to make lesser number of http requests from the server.
3. optimize or compress the script files to have smaller size and faster loading.
Blog Or News Release
There is no Blog associated with your site.

Having a blog is a great way to provide fresh content and retain users, search engines favour it too.


Tips:
1. regularly update your blog and provide fresh and quality content.
2. relevant blogs of your website topics, generate more credits in the eyes of your visitors, as well as search engines.
DMOZ Listing
No

Your site is not listed in the DMOZ Open Directory. DMOZ Open Directory Project

Google Analytics
UA-2460904-9 Excellent! the website implements Google Analytics.

Social Media Integration
Excellent! your site is well integrated with social media networks.

Facebook Pagehttps://www.facebook.com/solgenomics
Twitter Accounthttps://twitter.com/solgenomics
Google+ PageNot Found


Trustworthiness
0

No Trustworthiness Score is calculated for the site.

0
0 - 19 20 - 39 40 - 59 60 - 79 80 - 100
Very Poor Poor Unsatisfactory Good Excellent


Users are concerned about the safety of their online transactions. Trustworthiness rating is based on real user ratings and that tells you how much other users trust this site, so do the serch engines. note: this trustworthiness score is provided by WOT (Web of Trust).

Tips:
1. pay attention to the look and design of your site, many people look for visual cues when assessing a site`s credibility
2. make your site easy to use, sites that are easy to navigate are perceived as being more trustworthy.
3. make it easy for user to contact you, users will be more comfortable and feel more secured shall they need to get in touch with you.
Child Safe
0 No Child Safe Score is calculated for the site.

0
0 - 19 20 - 39 40 - 59 60 - 79 80 - 100
Very Poor Poor Unsatisfactory Good Excellent


Safe Browsing
Safe! the site musabase.org is NOT currently listed as suspicious, most-likely it is clean from malware and phining code [ verify this by Google Safe Browsing ]

Ensure that your site is malware free and does not cause harm to users` computers.

Tips:
1. do not put virus, malicious worms, adwares, trojans, spywares and suspicious phishing code in your server.
2. take suspicious behaviours seriously, have a regular check-up and monitor closely of your server`s log files.
3. if your site is black-listed by Google as suspicious, clean it up before requesting for a review.
Traffic Rank
5,009,671th most visited website in the world.
Your site is not among the most visited 1 million websites in the world.
Websites On Same Server
Excellent! You do have very few domains (1 - musabase.org) hosted on the same server as musabase.org (ip : 132.236.81.172).

Too many domains hosted on the same server is an indicator that you are not really serious about your website, and your site will have a higher chance to be surrounded by bad neighbours.

Tips:
1. the fewer domains hosted on the same server/ip the better.
2. avoid shared hosting whenever possible, especially when there are already hundreds or thousands of sites are hosted on the same server.
3. dedicated ip or resources for your site not only do good to your site visitors but also favoured by search engines.
Server Location
your server (IP : 132.236.81.172) is located at United States  
ensure your server is not located far away from most of your site visitors.
HTTP Compression
No

your website server does not support HTTP Compression.

Caching
No

your website server does not support Caching.

Server Signature
Excellent! the website server signature is off.

A secure and safe server is not only good for your site visitors but also good for search engines.

Tips:
1. server software version information can be utilized by malicious visitors to attack your server.
2. by turning off the server signature, you actually have made your server a little bit more secure.
3. for Apache server - edit the apache2.conf or the .htaccess file to turn server signature off.
Domain Age
10 years, 198 days old ( 1st registered on : 2014-05-12 )


[ To check the detailed whois info, Use this Whois Lookup Tool ]

excellent, the domain age is old enough.

Domain Expires
0 years, 166 days from today ( expires on : 2025-05-12 )


[ To check the detailed whois info, Use this Whois Lookup Tool ]

domain is expiring in less than a year.

Domain Info
musabase.org ( 12 characters )

Domain Registrar : Public Interest Registry

[ To check the detailed whois info, Use this Whois Lookup Tool ]

Domain Created On Last Modified On Expires On
2014-05-12 2014-05-12 2025-05-12
10 years, 198 days old 10 years, 198 days ago 0 years, 166 days from today
10 years, 198 days old


Domain Name Servers used by musabase.org
DNS Name IP Address
ns3.worldnic.com162.159.26.110
ns4.worldnic.com162.159.27.124


Domain is going to expire in less than a year time (0 years, 166 days from today), try to renew it for more than one year!

domain name choice and domain age are crucial for SEO.

Tips:
1. keep the domain name short and relevant to the content, which will be easier to be remembered and related to.
2. older domain tends to be more trustworthy.
3. register a domain for more than 1 year, and search engine will think it is a serious business.


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